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This web interface to PFSEARCH is meant to be used in conjunction with the MSA hub. To make a proficient use of this service, new users are warmly encouraged to read the relative help page about PSI-BLAST.
Sequence Input

Mandatory parameters
seq_source sw - Swiss-Prot
bact - Some complete proteomes from Bacteria
arch - Some complete proteomes from Archaea
euk - Some complete proteomes from Eukayota
sw_var - Swiss-Prot splice variants
ur50 - UniRef50
ur50_win20 - UniRef50 window shuffled (w=20)
ecoli - Escherichia coli K12 proteome

This service is very computer intensive, please be patient.